Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Retinoid-Sensitive Epigenetic Regulation of the Hoxb Cluster Maintains Normal Hematopoiesis and Inhibits Leukemogenesis
Qian P, De Kumar B, He XC, Nolte C, Gogol M, Ahn Y, Chen S, Li Z, Xu H, Perry JM, Hu D, Tao F, Zhao M, Han Y, Hall K, Peak A, Paulson A, Zhao C, Venkatraman A, Box A, Perera A, Haug JS, Parmely T, Li H, Krumlauf R, Li L. Cell Stem Cell.2018;22:740-754 e747.
Insulin resistance in cavefish as an adaptation to a nutrient-limited environment
Riddle MR, Aspiras AC, Gaudenz K, Peuss R, Sung JY, Martineau B, Peavey M, Box AC, Tabin JA, McGaugh S, Borowsky R, Tabin CJ, Rohner N. Nature.2018;555:647-651. Authors Correction: Nature. 2020 Nov 13. pii: 10.1038/s41586-020-2953-x. doi: 10.1038/s41586-020-2953-x.
Single-cell transcriptome analysis of avian neural crest migration reveals signatures of invasion and molecular transitions
Morrison JA, McLennan R, Wolfe LA, Gogol MM, Meier S, McKinney MC, Teddy JM, Holmes L, Semerad CL, Box AC, Li H, Hall KE, Perera AG, Kulesa PM. eLife.2017;6:e28415. doi: 28410.27554/eLife.28415.
Multiplexed cell-based sensors for assessing the impact of engineered systems and methods on cell health
Varma S, Fendyur A, Box A, Voldman J. Anal Chem.2017;89:4663-4670.
Not All H3K4 Methylations Are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification
Hu D, Gao X, Cao K, Morgan MA, Mas G, Smith ER, Volk AG, Bartom ET, Crispino JD, Di Croce L, Shilatifard A. Mol Cell.2017;65:460-475 e466.
Therapeutic Targeting of MLL Degradation Pathways in MLL-Rearranged Leukemia
Liang K, Volk AG, Haug JS, Marshall SA, Woodfin AR, Bartom ET, Gilmore JM, Florens L, Washburn MP, Sullivan KD, Espinosa JM, Cannova J, Zhang J, Smith ER, Crispino JD, Shilatifard A. Cell.2017;168:59-72.e13.
The Dlk1-Gtl2 Locus Preserves LT-HSC Function by Inhibiting the PI3K-mTOR Pathway to Restrict Mitochondrial Metabolism.
Qian P, He XC, Paulson A, Li Z, Tao F, Perry JM, Guo F, Zhao M, Zhi L, Venkatraman A, Haug JS, Parmely T, Li H, Dobrowsky RT, Ding WX, Kono T, Ferguson-Smith AC, Li L. Cell Stem Cell. 2016;18:214-228.
Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.
Liang K, Woodfin AR, Slaughter BD, Unruh JR, Box AC, Rickels RA, Gao X, Haug JS, Jaspersen SL, Shilatifard A. Mol Cell. 2015;60:435-445.
Wnt signaling-mediated redox regulation maintains the germ line stem cell differentiation niche.
Wang S, Gao Y, Song X, Ma X, Zhu X, Mao Y, Yang Z, Ni J, Li H, Malanowski KE, Anoja P, Park J, Haug J, Xie T. eLife. 2015;4:e08174. doi: 08110.07554/eLife.08174.
VEGF Signals induce trailblazer cell identity that Drives Neural Crest Migration.
McLennan R, Schumacher LJ, Morrison JA, Teddy JM, Ridenour DA, Box AC, Semerad CL, Li H, McDowell W, Kay D, Maini PK, Baker RE, Kulesa PM. Dev Biol. 2015;407:12-25
Single-Cell Based Quantitative Assay of Chromosome Transmission Fidelity.
Zhu J, Heinecke D, Mulla W, Bradford WD, Rubinstein B, Box A, Haug JS, Li R. G3 (Bethesda). 2015.;5:1043-56.
Neural crest migration is driven by a few trailblazer cells with a unique molecular signature narrowly confined to the invasive front.
McLennan R, Schumacher LJ, Morrison JA, Teddy JM, Ridenour DA, Box AC, Semerad CL, Li H, McDowell W, Kay D, Maini PK, Baker RE, Kulesa PM. Development. 2015;142:2014-2025.
Targeting the Adaptability of Heterogeneous Aneuploids.
Chen G, Mulla WA, Kucharavy A, Tsai HJ, Rubinstein B, Conkright J, McCroskey S, Bradford WD, Weems L, Haug JS, Seidel CW, Berman J, Li R. Cell. 2015;160:771-784.
A Phospho-SIM in the Antiviral Protein PML is Required for Its Recruitment to HSV-1 Genomes.
Smith MC, Box AC, Haug JS, Lane WS, Davido DJ. Cells. 2014;3:1131-1158.
Piwi is required in multiple cell types to control germline stem cell lineage development in the Drosophila ovary.
Ma X, Wang S, Do T, Song X, Inaba M, Nishimoto Y, Liu LP, Gao Y, Mao Y, Li H, McDowell W, Park J, Malanowski K, Peak A, Perera A, Li H, Gaudenz K, Haug J, Yamashita Y, Lin H, Ni JQ, Xie T. PLoS One. 2014;9:e90267.
Functional Genomic Analysis of the Periodic Transcriptome in the Developing Drosophila Wing.
Liang L, Haug J, Seidel CW, Gibson MC. Dev Cell. 2014;29:112-127.
The neural crest cell cycle is related to phases of migration in the head.
Ridenour DA, McLennan R, Teddy JM, Semerad CL, Haug JS, Kulesa PM. Development. 2014;141:1095-1103.
Maternal imprinting at the H19-Igf2 locus maintains adult haematopoietic stem cell quiescence.
Venkatraman A, He XC, Thorvaldsen JL, Sugimura R, Perry JM, Tao F, Zhao M, Christenson MK, Sanchez R, Yu JY, Peng L, Haug JS, Paulson A, Li H, Zhong XB, Clemens TL, Bartolomei MS, Li L. Nature. 2013;500:345-349.
Isolation and characterization of intestinal stem cells based on surface marker combinations and colony-formation assay.
Wang F, Scoville D, He XC, Mahe MM, Box A, Perry JM, Smith NR, Lei NY, Davies PS, Fuller MK, Haug JS, McClain M, Gracz AD, Ding S, Stelzner M, Dunn JC, Magness ST, Wong MH, Martin MG, Helmrath M, Li L. Gastroenterology. 2013;145:383-395 e321.
Noncanonical wnt signaling maintains hematopoietic stem cells in the niche.
Sugimura R, He XC, Venkatraman A, Arai F, Box A, Semerad C, Haug JS, Peng L, Zhong XB, Suda T, Li L. Cell. 2012;150:351-365.
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When LIN41 Comes to a Fork in the Road, It Takes BOTH Paths: Translational Repression OR mRNA Decay, Depending on the Target Site Position
Hand JM, Bazzini AA. Mol Cell.2017;65:375-377.
Using fluorescent reporters in conjunction with cytometry and statistics to assess nuclear accumulation of ribosomal proteins
Kim DH, Box AC, Li H, Gerton JL. Methods Mol Biol.2017;1515:217-226.
Cost accounting method for cytometry facilities.
Box AC, Park J, Semerad CL, Konnesky J, Haug JS. Cytometry A. 2012;81:439-444.
A role for RhoA in the two-phase migratory pattern of post-otic neural crest cells
Rupp PA, Kulesa PM. Dev Biol.2007;311:159-171.
