Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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b-Catenin and Associated Proteins Regulate Lineage Differentiation in Ground State Mouse Embryonic Stem Cells
Tao F, Soffers J, Hu D, Chen S, Gao X, Zhang Y, Zhao C, Smith SE, Unruh JR, Zhang D, Tsuchiya D, Venkatraman A, Zhao M, Li Z, Qian P, Parmely T, He XC, Washburn M, Florens L, Perry JM, Zeitlinger J, Workman J, Li L. Stem Cell Rep. 2020;15:662-676.
Glycolysis regulates gene expression by promoting the crosstalk between H3K4 trimethylation and H3K14 acetylation in Saccharomyces cerevisiae
Wu Y, Zhang S, Gong X, Yu Q, Zhang Y, Luo M, Zhang X, Workman JL, Yu X, Li S. J Genet Genomics = Yi chuan xue bao. 2019;46:561-574.
Identification of a nuclear localization signal and importin beta members mediating NUAK1 nuclear import inhibited by oxidative stress
Palma M, Riffo EN, Suganuma T, Washburn MP, Workman JL, Pincheira R, Castro AF. J Cell Biochem. 2019;120:16088-16107.
Set1-catalyzed H3K4 trimethylation antagonizes the HIR/Asf1/Rtt106 repressor complex to promote histone gene expression and chronological life span
Mei Q, Xu C, Gogol M, Tang J, Chen W, Yu X, Workman JL, Li S. Nucleic Acids Res. 2019;47:3434-3449.
Characterization of a metazoan ADA acetyltransferase complex
Soffers JHM, Li X, Saraf A, Seidel CW, Florens L, Washburn MP, Abmayr SM, Workman JL. Nucleic Acids Res. 2019;47:3383-3394.
MPTAC Determines APP Fragmentation via Sensing Sulfur Amino Acid Catabolism
Suganuma T, Swanson SK, Gogol M, Garrett TJ, Conkright-Fincham J, Florens L, Washburn MP, Workman JL. Cell Rep.2018;24:1585-1596.
Histone H3 threonine 11 phosphorylation by Sch9 and CK2 regulates chronological lifespan by controlling the nutritional stress response.
Oh S, Suganuma T, Gogol MM, Workman JL. eLife.2018;7:e36157. doi: 36110.37554/eLife.36157.
A structured workflow for mapping human Sin3 histone deacetylase complex interactions using Halo-MudPIT AP-MS
Banks CAS, Thornton JL, Eubanks CG, Adams MK, Miah S, Boanca G, Liu X, Katt ML, Parmely TJ, Florens L, Washburn MP. Mol Cell Proteomics.2018;17:1432-1447.
Enzymatic modules of the SAGA chromatin-modifying complex play distinct roles in Drosophila gene expression and development
Li X, Seidel CW, Szerszen LT, Lange JJ, Workman JL, Abmayr SM. Genes Dev.2017;31:1588-1600.
Myeloid Leukemia Factor acts in a chaperone complex to regulate transcription factor stability and gene
Dyer JO, Dutta A, Gogol M, Weake VM, Dialynas G, Wu X, Seidel C, Zhang Y, Florens L, Washburn MP, Abmayr SM, Workman JL. J Mol Biol.2017;429:2093-2107.
Composition and Function of Mutant Swi/Snf Complexes
Dutta A, Sardiu M, Gogol M, Gilmore J, Zhang D, Florens L, Abmayr SM, Washburn MP, Workman JL. Cell Rep. 2017;18:2124-2134.
Chromatin remodeler Fun30Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation
Lee J, Shik Choi E, David Seo H, Kang K, Gilmore JM, Florens L, Washburn MP, Choe J, Workman JL, Lee D. Nat Commun.2017;8:14527. doi: 14510.11038/ncomms14527.
Role of Nhp6 and Hmo1 in SWI/SNF occupancy and nucleosome landscape at gene regulatory regions
Hepp MI, Smolle M, Gidi C, Amigo R, Valenzuela N, Arriagada A, Maureira A, Gogol MM, Torrejon M, Workman JL, Gutierrez JL. Biochim Biophys Acta.2017;1860:316-326..
Selective suppression of antisense transcription by Set2-mediated H3K36 methylation
Venkatesh S, Li H, Gogol MM, Workman JL. Nat Commun.2016;7:e13610. doi: 13610.11038/ncomms13610.
USP44 Is an Integral Component of N-CoR that Contributes to Gene Repression by Deubiquitinating Histone H2BUSP44 Is an Integral Component of N-CoR that Contributes to Gene Repression by Deubiquitinating Histone H2B
Lan X, Atanassov BS, Li W, Zhang Y, Florens L, Mohan RD, Galardy PJ, Washburn MP, Workman JL, Dent SY. Cell Rep.2016;17:2382-2393.
Limiting PCNA-unloading at the G1/S transition
Huang F, Abmayr SM, Workman JL. Limiting PCNA-unloading at the G1/S transition. Cell Cycle.2016;15:3001-3002.
Cytoplasmic ATXN7L3B Interferes with Nuclear Functions of the SAGA Deubiquitinase Module
Li W, Atanassov BS, Lan X, Mohan RD, Swanson SK, Farria AT, Florens L, Washburn MP, Workman JL, Dent SY. Mol Cell Biol. 2016;36:2855-2866.
Egf signaling directs neoblast repopulation by regulating asymmetric cell division in planarians
Lei K, Thi-Kim Vu H, Mohan RD, McKinney SA, Seidel CW, Alexander R, Gotting K, Workman JL, Sánchez Alvarado A. Dev Cell. 2016;38:413-429.
WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.
Gilmore JM, Sardiu ME, Groppe BD, Thornton JL, Liu X, Dayebgadoh G, Banks CA, Slaughter BD, Unruh JR, Workman JL, Florens L, Washburn MP. PloS One. 2016;11:e0155492. doi: 0155410.0151371/journal.pone.0155492.
The Enok acetyltransferase complex interacts with Elg1 and negatively regulates PCNA unloading to promote the G1/S transition
Huang F, Saraf A, Florens L, Kusch T, Swanson SK, Szerszen LT, Li G, Dutta A, Washburn MP, Abmayr SM, Workman JL. Genes Dev. 2016;30:1198-1210.
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Stem Cells and Regeneration in the Digestive System: Keystone Meeting
Soffers JH, Hansen D, Sinagoga KL, Li B, Martin MG, Wells J, Grompe M, Li L. Gastroenterology.2016;151:e6-9.
Regulation of KAT6 acetyltransferases and their roles in cell cycle progression, stem cell maintenance, and human disease
Huang F, Abmayr SM, Workman JL. Mol Cell Biol.2016;36:1900-1907.
CHROMATIN. It takes teamwork to modify chromatin.
Workman JL. Science. 2016;351:667.
Histone modification as a reflection of metabolism
Suganuma T, Workman JL. Cell Cycle.2016;15:481-482.
Tracing myoblast fusion in Drosophila embryos by fluorescent actin probes.
Haralalka S, Abmayr SM. Methods Mol Biol. 2015;1313:149-164.
Histone exchange, chromatin structure and the regulation of transcription.
Venkatesh S, Workman JL. Nat Rev Mol Cell Biol. 2015;16:178-189.
Drosophila models reveal novel insights into mechanisms underlying neurodegeneration.
Mohan RD, Workman JL, Abmayr SM. Fly. 2014;8:148-152.
MicroRNAs in stem cells and cancer stem cells
Mohan RD, Bibber B, Sinha G, Patel SA, Rameshwar P. MicroRNA in Development and in the Progression of Cancer. New Jersey: Springer; 2013:81.
The expanding role for chromatin and transcription in polyglutamine disease.
Mohan RD, Abmayr SM, Workman JL. Curr Opin Genet Dev. 2014;26C:96-104.
Emerging Areas of Chromatin Research
Suganuma T. In: JL Workman, and SM Abmayr, eds. Fundamentals of Chromatin. New York, NY: Springer; 2014.
Transcription Through Chromatin
Smolle M, Venkatesh S. Transcription Through Chromatin. In: JL Workman, and SM Abmayr, eds. Fundamentals of Chromatin. New York, NY: Springer; 2014:427-489.
Reading Histone Modifications
Ruan C, Li B. Reading Histone Modifications. In: JL Workman, and SM Abmayr, eds. Fundamentals of Chromatin. New York, NY: Springer; 2014:355-373.
Histone Ubiquitylation Control of Gene Expression
Weake V, Abmayr SM, Workman JL. In: SM Abmayr, and JL Workman, eds. Fundamentals of Chromatin. New York, NY: Springer; 2014:257-307.
Fundamentals of Chromatin
Workman JL, Abmayr SM, eds. New York, Springer. 2014.
Recognizing methylated histone variant H3.3 to prevent tumors.
Venkatesh S, Workman JL. Cell Res. 2014;24:649-660.
Pulling complexes out of complex diseases: Spinocerebellar Ataxia 7.
Mohan RD, Abmayr SM, Workman JL. Rare Dis. 2014;2:e28859.
Remodelling without a power stroke.
Dutta A, Workman JL. EMBO Rep.2013;14:1030-1031.
Set2 mediated H3 lysine 36 methylation: regulation of transcription elongation and implications in organismal development.
Venkatesh S, Workman JL. WIREs Dev Biol. 2013;2:685-700.
Nucleosome Remodeling and Epigenetics
Becker PB, Workman JL. Cold Spring Harb Perspect Biol. 2013;5:a017905. doi: 017910.011101/cshperspect.a017905.
Directing transcription to the right way.
Huang F, Workman JL. Cell Res. 2013;23:1153-1154.
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