Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Probing the Sensitivity of the Orbitrap Lumos Mass Spectrometer using a Standard Reference Protein in a Complex Background
Levy MJ, Washburn MP, Florens L. J Proteome Res. 2018;17:3586-3592.
PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation
Choi J, Saraf A, Florens L, Washburn MP, Busino L. Cell Cycle. 2018;17:2243-2255.
Differential HDAC1/2 network analysis reveals a role for prefoldin/CCT in HDAC1/2 complex assembly
Banks CAS, Miah S, Adams MK, Eubanks CG, Thornton JL, Florens L, Washburn MP. Sci Rep.2018;9:18712.
DYRK1A interacts with histone acetyl transferase p300 and CBP and localizes to enhancers
Vitorino FNL, Montoni F, Moreno JN, de Souza BF, Lopes MC, Cordeiro B, Fonseca CS, Gilmore JM, Sardiu MI, Reis MS, Florens LA, Washburn MP, Armelin HA, da Cunha JPC. Proteomics. 2018;18:e1800203. doi: 1800210.1801002/pmic.201800203.
Schizosaccharomyces pombe Pol II transcription elongation factor ELL functions as part of a rudimentary super elongation complex
Gopalan S, Gibbon DM, Banks CAS, Zhang Y, Florens LA, Washburn MP, Dabas P, Sharma N, Seidel CW, Conaway RC, Conaway JW. Nucleic Acids Res.2018;1:gky173. doi: 110.1093/nar/gky1713.
MPTAC Determines APP Fragmentation via Sensing Sulfur Amino Acid Catabolism
Suganuma T, Swanson SK, Gogol M, Garrett TJ, Conkright-Fincham J, Florens L, Washburn MP, Workman JL. Cell Rep.2018;24:1585-1596.
FGF-2 Antiproliferative Stimulation Induces Proteomic Dynamic Changes and High Expression of fosB and junB in K-Ras-Driven Mouse Tumor Cells
Vitorino FNL, Montoni F, Moreno JN, de Souza BF, Lopes MC, Cordeiro B, Fonseca CS, Gilmore JM, Sardiu MI, Reis MS, Florens LA, Washburn MP, Armelin HA, da Cunha JPC. Proteomics.2018:e1800203.
Analysis of RNA-Seq datasets reveals enrichment of tissue-specific splice variants for nuclear envelope proteins.
Capitanchik C, Dixon CR, Swanson SK, Florens L, Kerr ARW, Schirmer EC. Nucleus. 2018;9:410-430.
Loss of KLHL6 promotes diffuse large B-cell lymphoma growth and survival by stabilizing the mRNA decay factor roquin2
Choi J, Lee K, Ingvarsdottir K, Bonasio R, Saraf A, Florens L, Washburn MP, Tadros S, Green MR, Busino L. Nat Cell Biol.2018;20:586-596.
A structured workflow for mapping human Sin3 histone deacetylase complex interactions using Halo-MudPIT AP-MS
Banks CAS, Thornton JL, Eubanks CG, Adams MK, Miah S, Boanca G, Liu X, Katt ML, Parmely TJ, Florens L, Washburn MP. Mol Cell Proteomics.2018;17:1432-1447.
dCas9-targeted locus-specific protein isolation method identifies histone gene regulators
Tsui C, Inouye C, Levy M, Lu A, Florens L, Washburn MP, Tjian R. Proc Natl Acad Sci U S A.2018;115:E2734-E2741.
Merkel cell polyomavirus recruits MYCL to the EP400 complex to promote oncogenesis
Cheng J, Park DE, Berrios C, White EA, Arora R, Yoon R, Branigan T, Xiao T, Westerling T, Federation A, Zeid R, Strober B, Swanson SK, Florens L, Bradner JE, Brown M, Howley PM, Padi M, Washburn MP, DeCaprio JA. PLoS Pathog.2017;13:e1006668. doi: 1006610.1001371/journal.ppat.1006668.
The WHHERE coactivator complex is required for retinoic acid-dependent regulation of embryonic symmetry
Vilhais-Neto GC, Fournier M, Plassat JL, Sardiu ME, Saraf A, Garnier JM, Maruhashi M, Florens L, Washburn MP, Pourquie O. Nat Commun.2017;8:728. doi: 710.1038/s41467-41017-00593-41466.
HOXA1 and TALE proteins display cross-regulatory interactions and form a combinatorial binding code on HOXA1 targets
De Kumar B, Parker HJ, Paulson A, Parrish ME, Pushel I, Singh NP, Zhang Y, Slaughter BD, Unruh JR, Florens L, Zeitlinger J, Krumlauf R. Genome Res.2017;27:1501-1512.
The human cytoplasmic dynein interactome reveals novel activators of motility
Redwine WB, DeSantis ME, Hollyer I, Htet ZM, Tran PT, Swanson SK, Florens L, Washburn MP, Reck-Peterson SL. eLife.2017;6:e28257. doi: 28210.27554/eLife.28257.
Myeloid Leukemia Factor acts in a chaperone complex to regulate transcription factor stability and gene
Dyer JO, Dutta A, Gogol M, Weake VM, Dialynas G, Wu X, Seidel C, Zhang Y, Florens L, Washburn MP, Abmayr SM, Workman JL. J Mol Biol.2017;429:2093-2107.
PTEN counteracts FBXL2 to promote IP3R3- and Ca2+-mediated apoptosis limiting tumor growth
Kuchay S, Giorgi C, Simoneschi D, Pagan J, Missiroli S, Saraf A, Florens L, Washburn MP, Collazo-Lorduy A, Castillo-Martin M, Cordon-Cardo C, Sebti SM, Pinton P, Pagano M. Nature.2017;546:554-561.
Different phosphoisoforms of RNA polymerase II engage the Rtt103 termination factor in a structurally analogous manner
Nemec CM, Yang F, Gilmore JM, Hintermair C, Ho YH, Tseng SC, Heidemann M, Zhang Y, Florens L, Gasch AP, Eick D, Washburn MP, Varani G, Ansari AZ. Proc Natl Acad Sci U S A.2017;114:E3944-E39.
Mediator structure and rearrangements required for holoenzyme formation
Tsai KL, Yu X, Gopalan S, Chao TC, Zhang Y, Florens L, Washburn MP, Murakami K, Conaway RC, Conaway JW, Asturias FJ. Nature.2017;544:196-201.
The TDH-GCN5L1-Fbxo15-KBP axis limits mitochondrial biogenesis in mouse embryonic stem cells
Donato V, Bonora M, Simoneschi D, Sartini D, Kudo Y, Saraf A, Florens L, Washburn MP, Stadtfeld M, Pinton P, Pagano M. Nat Cell Biol.2017;19:341-351.
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