Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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HP1a targets the Drosophila KDM4A demethylase to a subset of heterochromatic genes to regulate H3K36me3 levels.
Lin C-H, Paulson A, Abmayr SM, Workman JL. PLoS One. 2012:e39758.
Acetylation of the SUN protein Mps3 by Eco1 regulates its function in nuclear organization.
Ghosh S, Gardner JM, Smoyer CJ, Friederichs JM, Unruh JR, Slaughter BD, Alexander R, Chisholm RD, Lee KK, Workman JL, Jaspersen SL. Mol Biol Cell. 2012;23:2546-2559.
Characterization of a highly conserved histone related protein, ydl156w, and its functional associations using quantitative proteomic analyses.
Gilmore JM, Sardiu ME, Venkatesh S, Stutzman B, Peak A, Seidel CW, Workman JL, Florens L, Washburn MP. Mol Cell Proteomics. 2012;11:M111 011544.
Human CCAAT/Enhancer-Binding Protein beta Interacts with Chromatin Remodeling Complexes of the Imitation Switch Subfamily.
Steinberg XP, Hepp MI, Fernandez Garcia Y, Suganuma T, Swanson SK, Washburn M, Workman JL, Gutierrez JL. Biochemistry. 2012;51:952-962.
A metazoan ATAC acetyltransferase subunit that regulates MAP kinase signaling is related to an ancient molybdopterin synthase component.
Suganuma T, Mushegian A, Swanson SK, Florens L, Washburn MP, Workman JL. Mol Cell Proteomics. 2012;11:90-99.
Histone density is maintained during nucleosomal transcription mediated by RSC and NAP1 in vitro.
Kuryan BG, Kim J, Tran NNH, Lombardo SR, Venkatesh S, Workman JL, Carey M. PNAS. 2012;109:1931-1936.
Structure and nucleosome interaction of the yeast NuA4 and Piccolo-NuA4 histone acetyltransferase complexes.
Chittuluru JR, Chaban Y, Monnet-Saksouk J, Carrozza MJ, Sapountzi V, Selleck W, Huang J, Utley RT, Cramet M, Allard S, Cai G, Workman JL, Fried MG, Tan S, Cote J, Asturias FJ. Nat Struct Mol Biol. 2011;18:1196-1203.
Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation.
Weake VM, Dyer JO, Seidel C, Box A, Swanson SK, Peak A, Florens L, Washburn MP, Abmayr SM, Workman JL. Genes Dev. 2011;25:1499-1509.
Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes.
Lee KK, Sardiu ME, Swanson SK, Gilmore JM, Torok M, Grant PA, Florens L, Workman JL, Washburn MP. Mol Syst Biol. 2011;7:503.
Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation
Bian C, Xu C, Ruan J, Lee KK, Burke TL, Tempel W, Barsyte D, Li J, Wu M, Zhou BO, Fleharty BE, Paulson A, Allali-Hassani A, Zhou JQ, Mer G, Grant PA, Workman JL, Zang J, Min J. EMBO J. 2011;30:2829-2842.
Asymmetric Mbc, active Rac1 and F-actin foci in the fusion-competent myoblasts during myoblast fusion in Drosophila.
Haralalka S, Shelton C, Cartwright HN, Katzfey E, Janzen E, Abmayr SM. Development. 2011;138:1551 - 1562.
Highly reproducible label free quantitative proteomic analysis of RNA polymerase complexes.
Mosley AL, Sardiu ME, Pattenden SG, Workman JL, Florens L, Washburn MP. Mol Cell Proteomics. 2011;10:M110 000687.
Gcn5 regulates the dissociation of SWI/SNF from chromatin by acetylation of Swi2/Snf2.
Kim JH, Saraf A, Florens L, Washburn M, Workman JL. Genes Dev. 2010;24:2766-2771.
Psh1 Is an E3 Ubiquitin Ligase that Targets the Centromeric Histone Variant Cse4.
Hewawasam G, Shivaraju M, Mattingly M, Venkatesh S, Martin-Brown S, Florens L, Workman JL, Gerton JL. Mol Cell. 2010;40:444-454.
Features of cryptic promoters and their varied reliance on bromodomain-containing factors.
Pattenden SG, Gogol MM, Workman JL. PLoS One. 2010;5:e12927.
Heterochromatin protein 1 (HP1) connects the FACT histone chaperone complex to the phosphorylated CTD of RNA polymerase II.
Kwon SH, Florens L, Swanson SK, Washburn MP, Abmayr SM, Workman JL. Genes Dev. 2010;24:2133-2145.
The ATAC Acetyltransferase Complex Coordinates MAP Kinases to Regulate JNK Target Genes.
Suganuma T, Mushegian A, Swanson SK, Abmayr SM, Florens L, Washburn MP, Workman JL. Cell. 2010;142:726-736.
Phosphorylated Pol II CTD recruits multiple HDACs, including Rpd3C(S), for methylation-dependent deacetylation of ORF nucleosomes.
Govind CK, Qiu H, Ginsburg DS, Ruan C, Hofmeyer K, Hu C, Swaminathan V, Workman JL, Li B, Hinnebusch AG. Mol Cell. 2010;39:234-246.
Rere controls retinoic acid signalling and somite bilateral symmetry
Vilhais-Neto GC, Maruhashi M, Smith KT, Vasseur-Cognet M, Peterson AS, Workman JL, Pourquie O. Nature. 2010;463:953-957.
Deacetylase Inhibitors Dissociate the Histone-Targeting ING2 Subunit from the Sin3 Complex.
Smith KT, Martin-Brown SA, Florens L, Washburn MP, Workman JL. Chem Biol. 2010;17:65-74.
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The changing faces of HP1: From heterochromatin formation and gene silencing to euchromatic gene expression: HP1 acts as a positive regulator of transcription.
Kwon SH, Workman JL. BioEssays. 2011;33:280-289.
Features of the PHF8/KIAA1718 histone demethylase.
Suganuma T, Workman JL. Cell Res. 2010;20:861-862.
Myoblast fusion in Drosophila.
Haralalka S, Abmayr SM. Exp Cell Res. 2010;316:3007-3013.
Inducible gene expression: diverse regulatory mechanisms.
Weake VM, Workman JL. Nat Rev Genet. 2010;11:426-437.
Histone acetylation in heterochromatin assembly.
Kim JH, Workman JL. Genes Dev. 2010;24:738-740.
Rere controls retinoic acid signalling and somite bilateral symmetry.
Vilhais-Neto GC, Maruhashi M, Smith KT, Vasseur-Cognet M, Peterson AS, Workman JL, Pourquie O. Nature. 2010;463:953-957.
WD40 repeats arrange histone tails for spreading of silencing.
Suganuma T, Workman JL. J Mol Cell Biol. 2010;2:81-83.
Introducing the acetylome.
Smith KT, Workman JL. Nat Biotechnol. 2009;27:917-919.
Histone Ubiquitination.
Weake VM, Workman JL. In: RA Bradshaw, and EA Dennis, eds. Handbook of Cell Signaling. 2nd ed: Oxford: Academic Press; 2009:2449-2460.
Hit and run: X marks the spot!
Weake VM, Workman JL. Nat Struct Mol Biol. 2009;16:801-803.
Histone deacetylase inhibitors: Anticancer compounds
Smith KT, Workman JL. Int J Biochem Cell Biol. 2009;41:21-25.
The heterochromatin protein 1 (HP1) family: put away a bias toward HP1
Kwon SH, Workman JL. Mol Cells.2008;26:217-227.
Diverse functions of WD40 repeat proteins in histone recognition
Suganuma T, Pattenden SG, Workman JL. Genes Dev.2008;22:1265-1268.
Crosstalk among Histone Modifications
Suganuma T, Workman JL. Cell.2008;135:604-607.
Histone Ubiquitination: Triggering Gene Activity
Weake VM, Workman JL. Mol Cell.2008;29:653-663.
Clearing the Way for Unpaused Polymerases
Weake VM, Workman JL. Cell.2008;134:16-18.
New nomenclature for chromatin-modifying enzymes
Allis CD, Berger SL, Cote J, Dent S, Jenuwien T, Kouzarides T, Pillus L, Reinberg D, Shi Y, Shiekhattar R, Shilatifard A, Workman J, Zhang Y. Cell.2007;131:633-636.
Histone Variants and Complexes Involved in Their Exchange
Kusch T, Workman JL. Chromatin and Disease: Subcellular Biochemistry. New York: Springer 2007;41:91-110.
Histone acetyltransferase complexes: one size doesn't fit all
Lee KK, Workman JL. Nat Rev Mol Cell Biol.2007;8:284-295.
The Role of Chromatin During Transcription
Li B, Carey M, Workman JL. Cell.2007;128:707-719.
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