Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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A Whole-Chromosome Analysis of Meiotic Recombination in Drosophila melanogaster.
Miller DE, Takeo S, Nandanan K, Paulson A, Gogol MM, Noll AC, Perera AG, Walton KN, Gilliland WD, Li H, Staehling KK, Blumenstiel JP, Hawley RS. G3 (Bethesda). 2012;2:249-260.
Effects of a 28-Day Cage-Change Interval on Intracage Ammonia Levels, Nasal Histology, and Perceived Welfare of CD1 Mice.
Vogelweid CM, Zapien KA, Honigford MJ, Li L, Li H, Marshall H. J Am Assoc Lab Anim Sci. 2011;50:868-878.
Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).
Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M, Seidel C, Krumlauf R, Shilatifard A. Genes Dev. 2011;25:1486-1498.
Rupture of thin liquid films: Generalization of weakly nonlinear theory.
Rubinstein BY, Leshansky AM. Phys Rev E Stat Nonlin Soft Matter Phys. 2011;83:031603.
Targeting of the SUN protein Mps3 to the inner nuclear membrane by the histone variant H2A.Z.
Gardner JM, Smoyer CJ, Stensrud ES, Alexander R, Gogol M, Wiegraebe W, Jaspersen SL. J Cell Biol. 2011;193:489-507.
Modular coherence of protein dynamics in yeast cell polarity system.
Gao JT, Guimera R, Li H, Pinto IM, Sales-Pardo M, Wai SC, Rubinstein B, Li R. Proc Natl Acad Sci U S A. 2011;108:7647-7652.
High conservation of transcription factor binding and evidence for combinatorial regulation across six Drosophila species.
He Q, Bardet AF, Patton B, Purvis J, Johnston J, Paulson A, Gogol M, Stark A, Zeitlinger J. Nat Genet. 2011;43:414-420.
Capillary Pressure Curve for Liquid Menisci in a Cubic Assembly of Spherical Particles Below Irreducible Saturation.
Bear J, Rubinstein B, Fel L. Transport In Porous Media. 2011;89:63-73.
Prp8, the pivotal protein of the spliceosomal catalytic center, evolved from a retroelement-encoded reverse transcriptase.
Dlakic M, Mushegian A. RNA. 2011;17:799-808.
Evolutionarily conserved orthologous families in phages are relatively rare in their prokaryotic hosts.
Kristensen DM, Cai X, Mushegian A. J Bacteriol. 2011;193:1806-1814.
A polynomial-time algorithm computing lower and upper bounds of the rooted subtree prune and regraft distance.
Kannan L, Li H, Mushegian A. J Comput Biol. 2011;18:743-757.
Features of cryptic promoters and their varied reliance on bromodomain-containing factors.
Pattenden SG, Gogol MM, Workman JL. PLoS One. 2010;5:e12927.
Statistical analysis of nondisjunction assays in Drosophila.
Zeng Y, Li H, Schweppe NM, Hawley RS, Gilliland WD. Genetics. 2010;186:505-513.
A low-polynomial algorithm for assembling clusters of orthologous groups from intergenomic symmetric best matches.
Kristensen DM, Kannan L, Coleman MK, Wolf YI, Sorokin A, Koonin EV, Mushegian A. Bioinformatics. 2010;26:1481-1487.
Actin disassembly 'clock' and membrane tension determine cell shape and turning: a mathematical model.
Mogilner A, Rubinstein B. J Phys Condensed Matter. 2010;22:194118.
Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin.
Fournier ML, Paulson A, Pavelka N, Mosley AL, Gaudenz K, Bradford WD, Glynn E, Li H, Sardiu ME, Fleharty B, Seidel C, Florens L, Washburn MP. Mol Cell Proteomics. 2010;9:271-284.
Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation.
Nugent RL, Johnsson A, Fleharty B, Gogol M, Xue-Franzen Y, Seidel C, Wright AP, Forsburg SL. BMC Genomics. 2010;11:59.
Comparative genomics of ethanolamine utilization.
Tsoy O, Ravcheev D, Mushegian A. J Bacteriol. 2009;191:7157-7164.
Cohesinopathy mutations disrupt the subnuclear organization of chromatin.
Gard S, Light W, Xiong B, Bose T, McNairn AJ, Harris B, Fleharty B, Seidel C, Brickner JH, Gerton JL. J Cell Biol. 2009;187:455-462.
Actin-myosin viscoelastic flow in the keratocyte lamellipod.
Rubinstein B, Fournier MF, Jacobson K, Verkhovsky AB, Mogilner A. Biophys J. 2009;97:1853-1863.
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