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Publications

Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.

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Environmental and molecular control of tissue-specific ionocyte differentiation in zebrafish

Peloggia J, Lush ME, Tsai YY, Wood C, Piotrowski T. Development. 2024.

A kalihinol analog disrupts apicoplast function and vesicular trafficking in P. falciparum malaria

Chahine Z, Abel S, Hollin T, Barnes GL, Chung JH, Daub ME, Renard I, Choi JY, Vydyam P, Pal A, Alba-Argomaniz M, Banks CAS, Kirkwood J, Saraf A, Camino I, Castaneda P, Cuevas MC, De Mercado-Arnanz J, Fernandez-Alvaro E, Garcia-Perez A, Ibarz N, Viera-Morilla S, Prudhomme J, Joyner CJ, Bei AK, Florens L, Ben Mamoun C, Vanderwal CD, Le Roch KG. Science. 2024;385:eadm7966.

Sugar assimilation underlying dietary evolution of Neotropical bats

Camacho J, Bernal-Rivera A, Pena V, Morales-Sosa P, Robb SMC, Russell J, Yi K, Wang Y, Tsuchiya D, Murillo-Garcia OE, Rohner N. [published ahead of print August 28 2024]. Nat Ecol Evol. 2024.

Isthmus progenitor cells contribute to homeostatic cellular turnover and support regeneration following intestinal injury

Malagola E, Vasciaveo A, Ochiai Y, Kim W, Zheng B, Zanella L, Wang ALE, Middelhoff M, Nienhuser H, Deng L, Wu F, Waterbury QT, Belin B, LaBella J, Zamechek LB, Wong MH, Li L, Guha C, Cheng CW, Yan KS, Califano A, Wang TC. Cell. 2024;187:3056-3071 e3017.

The deubiquitinase Usp7 in Drosophila melanogaster is required for synaptonemal complex maintenance

Lake CM, Gardner J, Briggs S, Yu Z, McKown G, Hawley RS. Proc Natl Acad Sci U S A. 2024;121:e2409346121.

Protein profiling of zebrafish embryos unmasks a new regulatory layer during early embryogenesis

da Silva Pescador G, Baia Amaral D, Varberg JM, Zhang Y, Hao Y, Florens L, Bazzini AA. Cell Rep. 2024;43:114769.

Plasticity of the mitotic spindle in response to karyotype variation

Kunchala P, Varberg JM, O'Toole E, Gardner J, Smith SE, McClain M, Jaspersen SL, Hawley RS, Gerton JL. Curr Biol   2024.

An Integrated Structural Model of the DNA Damage Responsive H3K4me3 Binding WDR76:SPIN1 Complex with the Nucleosome

Liu X, Zhang Y, Wen Z, Hao Y, Banks CAS, Cesare J, Bhattacharya S, Arvindekar S, Lange JJ, Xie Y, Garcia BA, Slaughter BD, Unruh JR, Viswanath S, Florens L, Workman JL, Washburn MP. Proc Natl Acad Sci U S A. 2024;121:e2318601121.

Positional information modulates transient regeneration-activated cell states during vertebrate appendage regeneration

Ortega Granillo A, Zamora D, Schnittker RR, Scott AR, Spluga A, Russell J, Brewster CE, Ross EJ, Acheampong DA, Zhang N, Ferro K, Morrison JA, Rubinstein BY, Perera AG, Wang W, Sanchez Alvarado A. iScience. 2024;27:110737.

Quartz Crystal Microbalance Frequency Response to Discrete Adsorbates in Liquids

Leshansky AM, Rubinstein BY, Fouxon I, Johannsmann D, Sadowska M, Adamczyk Z.  Anal Chem. 2024;96:10559-10568.

Modeling the Evolution of Populations with Multiple Killer Meiotic Drivers

Lopez Hernandez JF, Rubinstein BY, Unckless RL, Zanders SE. G3 (Bethesda). 2024:jkae142 doi: 10.1093/g3journal/jkae142.

Identification and characterization of intermediate states in mammalian neural crest cell epithelial to mesenchymal transition and delamination

Zhao R, Moore EL, Gogol MM, Unruh JR, Yu Z, Scott AR, Wang Y, Rajendran NK, Trainor PA. eLife. 2024;13 doi: 10.7554/eLife.92844.

Identification of protein aggregates in the aging vertebrate brainwith prion-like and phase-separation properties

Harel I, Chen YR, Ziv I, Singh PP, Heinzer D, Navarro Negredo P, Goshtchevsky U, Wang W, Astre G, Moses E, McKay A, Machado BE, Hebestreit K, Yin S, Sánchez Alvarado A, Jarosz DF, Brunet A. Cell Rep. 2024:112787 doi: 10.1016/j.celrep.2023.112787.

Post-meiotic mechanism of facultative parthenogenesis in gonochoristic whiptail lizard species

Ho DV, Tormey D, Odell A, Newton AA, Schnittker RR, Baumann DP, Neaves WB, Schroeder MR, Sigauke RF, Barley AJ, Baumann P. eLife. 2024;13 doi: 10.7554/eLife.97035.

Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery

Warren WC, Rice ES, X M, Roback E, Keene A, Martin F, Ogeh D, Haggerty L, Carroll RA, McGaugh S, Rohner N. G3 (Bethesda). 2024:jka3103 doi: 10.1093/g3journal/jkae103.

A PAK family kinase and the Hippo/Yorkie pathway modulate WNT signaling to functionally integrate body axes during regeneration

Doddihal V, Mann FG, Jr., Ross EJ, McKinney MC, Guerrero-Hernandez C, Brewster CE, McKinney SA, Sanchez Alvarado A. Proc Natl Acad Sci U S A. 2024;121:e2321919121.

ZIKV Non-Coding RNAs Antagonize Antiviral Responses by PKR-Mediated Translational Arrest

Pallares HM, Ledesma MMGL, Rouco SO, Castellano LA, Costa Navarro GS, Fernandez-Alvarez AJ, D'Andreiz MJ, Aidas DV, Alvarez DE, Bazzini A, Gamarnik AV. ZIKV 2024.

Niche Tet maintains germline stem cells independently of dioxygenase activity

Tu R, Ping Z, Liu J, Tsoi ML, Song X, Liu W, Xie T. EMBO J. 2024;43:1570-1590.

Weinberger M, Simoes FC, Gungoosingh T, Sauka-Spengler T, Riley PR. Dev Cell. 2024;59:351-367 e356.

Host evolution shapes cavefish gut microbiome

Riddle MR, Nguyen NK, Nave M, Peuss R, Maldonado E, Rohner N, Tabin CJ. Ecol Evol. 2024;14:e11192.
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The Ruminant Telomere-to-Telomere (RT2T) Consortium

Kalbfleisch TS, McKay SD, Murdoch BM, Adelson DL, Almansa-Villa D, Becker G, Beckett LM, Benitez-Galeano MJ, Biase F, Casey T, Chuong E, Clark E, Clarke S, Cockett N, Couldrey C, Davis BW, Elsik CG, Faraut T, Gao Y, Genet C, Grady P, Green J, Green R, Guan D, Hagen D, Hartley GA, Heaton M, Hoyt SJ, Huang W, Jarvis E, Kalleberg J, Khatib H, Koepfi KP, Koltes J, Koren S, Kuehn C, Leeb T, Leonard A, Liu GE, Low WY, McConnell H, McRae K, Miga K, Mousel M, Neibergs H, Olagunju T, Pennell M, Petry B, Pewsner M, Phillippy AM, Pickett BD, Pineda P, Potapova T, Rachagani S, Rhie A, Rijnkels M, Robic A, Rodriguez Osorio N, Safonova Y, Schettini G, Schnabel RD, Sirpu Natesh N, Stegemiller M, Storer J, Stothard P, Stull C, Tosser-Klopp G, Traglia GM, Tuggle CK, Van Tassell CP, Watson C, Weikard R, Wimmers K, Xie S, Yang L, Smith TPL, O'Neill RJ, Rosen BD. Nat Genet. 2024;56:1566-1573.

The Stacking Cell Puzzle

Mir M, Nowotarski S. Patterns. 2024;5:101040.

Sankari S. Mol Plant Microbe Interact. 2024;37:543-544.

Navigating the post-pandemic terrain: lessons in resilience and adaptation

Zhao C, Chiriboga LA, Chlipala EA. J Histotechnol. 2024:1-2.

The SWI/SNF chromatin remodeling complex: a critical regulator of metabolism

Church MC, Workman JL. [published ahead of print April 26 2024]. Biochem Soc Trans. 2024.

A working model for the formation of Robertsonian chromosomes

Gerton JL. J Cell Sci. 2024;137:jcsw261912.

Rodgers CD, Memiya C, Arur S, Babonis L, Barres M, Bartlett M, Behringer RR, Benham-Pyle BW, Bergmann D, Blackman B, Brown CT, Browne B, Camacho J, Chabu CY, Chow I, Cleaver O, Cool J, Dennis MY, Dickenson AJ, Di Talia S, Frank M, Gillmor S, Haag ES, Hariharan IK, Harland R, Husbands A, Jerome-Majewska L, Koenig K, Labonne C, Layden MJ, Lowe C, Mani M, Martick M, McKown K, Moens C, Mosimann C, Onyenedum J, Reed R, Rivera A, rokhsar DS, Royer L, Rutaganiera F, Shahan R, Sinha N, Swalla BJ, Van Norman JM, Wagner DE, Wikramanayaka A, Zebell S, Brady SM. Development. 2024;151:dev202342 doi: 10.1242/dev.202342.

Rpd3S meets the nucleosome

Carrozza MJ, Workman JL. Cell Res. 2024;34:1-2.

Dynamic Changes in Ocular Shape During Human Development and its Implications for Retina Fovea Formation

Rasys AM, Wegerski A, Trainor PA, Hufnagel RB, Menke DB, Lauderdale JD. BioEssays. 2024;46:e2300054.

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