Genome-Wide Binding Analyses of HOXB1 Revealed a Novel DNA Binding Motif Associated with Gene Repression

Singh NP, De Kumar B, Paulson A, Parrish ME, Scott C, Zhang Y, Florens L, Krumlauf R. [published ahead of print March 4 2021]. Dev Biol. 2021;9.

The raw data files for ChIP-seq, ATAC-seq, and RNA-seq data were

submitted to the NCBI BioProject database: https://www.ncbi.nlm.nih.gov/sra/?term=PRJNA5
03882 (accessed on 28 December 2020), PRJNA341679, PRJNA335616, GSE61590, Sequence Read
Archive under accession no: SRX4980243 to SRX4980246 and Gene Expression Omnibus (GEO;
http://www.ncbi.nlm.nih.gov/geo/ (accessed on 28 December 2020)) under series accession number
GSE61590. The mass spectrometer datasets can be obtained from the MassIVE repository with
accessions MSV000086596 and from the ProteomeXChange with accessions PXD023129. The original
data used in this manuscript were also deposited to Stowers Institute Original Data Repository
and available online
Publication Notes 
DOI: 10.3390/jdb9010006

 

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