Publications

Original Research Papers
Bravo Nunez MA, Sabbarini IM, Eickbush MT, Liang Y, Lange JJ, Kent AM, Zanders SE. PLOS Genet. 2019.
Kim IV, Ross EJ, Dietrich S, Doring K, Sánchez Alvarado A, Kuhn CD. BMC Genomics. 2019;20:909. doi: 10.1186/s12864-019-6292-y.
Miah S, Banks CAS, Ogunbolude Y, Bagu ET, Berg JM, Saraf A, Tettey TT, Hattem G, Dayebgadoh G, Kempf CG, Sardiu M, Napper S, Florens L, Lukong KE, Washburn MP. Sci Adv. 2019;5:eaaw3113. doi: 3110.1126/sciadv.aaw3113.
Kim IV, Duncan EM, Ross EJ, Gorbovytska V, Nowotarski SH, Elliott SA, Sánchez Alvarado A, Kuhn CD. Genes Dev. 2019;33:1575-1590.
Loomis C, Peuss R, Jaggard JB, Wang Y, McKinney S, Raftopoulos A, Raftopoulos S, Whu D, Green MR, McGaugh SE, Rohner NE, Keene AC, Duboue ER. Front Neuroanat. 2019;13:88. doi: 10.3389/fnana.2019.00088.
Billmyre KK, Cahoon CK, Heenan GM, Wesley ER, Yu Z, Unruh JR, Takeo S, Hawley RS. Proc Natl Acad Sci U S A. 2019;116:21641-21650.
Vincent BJ, Rice GR, Wong GM, Glassford WJ, Downs KI, Shastay JL, Charles-Obi K, Natarajan M, Gogol M, Zeitlinger J, Rebeiz M. G3 (Bethesda). 2019. doi: 10.1534/g3.119.400788.
Story B, Ma X, Ishihara K, Li H, Hall K, Peak A, Anoja P, Park J, Haug J, Blanchette M, Xie T.  Life Sci Alliance. 2019;2:e201800211. doi: 10.26508/lsa.201800211.
Postlethwait JH, Navajas Acedo J, Piotrowski T. Zebrafish. 2019;16:469-476.
Ferro K, Peuss R, yang W, Rosenstiel P, Schulenburg H, Kurtz J. [published ahead of print September 23 2019]. PNAS. 2019.
Caballero D, Mendes Pinto I, Rubinstein B, Samitier J. Phys Biol. 2019.
Wang LY, He YX, Li M, Ding J, Sui Y, Conaway JW, Conaway RC, Wang F, Jin J, Cai Y. Protein Cell. 2019;10:694-699.
Palma M, Riffo EN, Suganuma T, Washburn MP, Workman JL, Pincheira R, Castro AF. J Cell Biochem. 2019;120:16088-16107.
Ramanathan SP, Krajnc M, Gibson MC. Dev Cell. 2019;51:49-61 e44.
Navajas Acedo J, Voas MG, Alexander R, Woolley T, Unruh JR, Li H, Moens C, Piotrowski T. Nat Commun. 2019;10:3993. doi: 3910.1038/s41467-41019-12005-y.
Dayebgadoh G, Sardiu ME, Florens L, Washburn MP. J Proteome Res. 2019;18:3479-3491.
Sardiu M, Florens L, Washburn MP. [published ahead of print September 3 2019]. Methods. 2019.
Stahl BA, Peuss R, McDole B, Kenzior A, Jaggard JB, Gaudenz K, Krishnan J, McGaugh SE, Duboue ER, Keene AC, Rohner N. Dev Dyn. 2019;248:679-687.
Guillamot M, Ouazia D, Dolgalev I, Yeung ST, Kourtis N, Dai Y, Corrigan K, Zea-Redondo L, Saraf A, Florens L, Washburn MP, Tikhonova AN, Malumbres M, Gong Y, Tsirigos A, Park C, Barbieri C, Khanna KM, Busino L, Aifantis I. Nat Immunol. 2019;20:1196-1207.
Prummel KD, Hess C, Nieuwenhuize S, Parker HJ, Rogers KW, Kozmikova I, Racioppi C, C. BE, Czarkwiani A, Knapp D, Burger S, Chiavacci E, Shah G, Burger A, Huisken J, Yun M, Christiaen L, Kozmik Z, Christiaen L, Muller P, Bronner M, Krumlauf R, Mosimann C. Nat Commun. 2019;10:e3857. doi: 3810.1038/s41467-41019-11561-41467.
Barido-Sottani J, Chapman SD, Kosman E, Mushegian AR. BMC Bioinformatics. 2019;20:435. doi: 410.1186/s12859-12019-13024-x.
Jordan T, Williams D, Criswell S, Wang Y. [published ahead of print August 17 2019]. J Histotechnol. 2019:1-6.
Wang Y, Xu W, Maddera L, Tsuchiya D, Thomas N, Yu CR, Parmely T. [published August 17 2019]. J Histotechnol. 2019:1-9.
Arnold CP, Benham-Pyle BW, Lange JJ, Wood CJ, Sánchez Alvarado A. Nature. 2019;572:655-659.
Cambronero F, Ariza-McNaughton L, Wiedemann LM, Krumlauf R. [published ahead of print August 14, 2019]. Dev Dyn. 2019.
Venkatesan S, Kandola TS, Rodriguez-Gama A, Box A, Halfmann R. J Vis Exp. 2019;149:e59577. doi: 59510.53791/59577.
Pinto BJ, Card DC, Castoe TA, Diaz RE, Jr., Nielsen SV, Trainor PA, Gamble T.  Dev Dyn. 2019;248:702-708.
Zhou N, Gutierrez-Uzquiza A, Zheng XY, Chang R, Vogl DT, Garfall AL, Bernabei L, Saraf A, Florens L, Washburn MP, Illendula A, Bushweller JH, Busino L. Leukemia. 2019;33:2006-2021.
Cloud V, Thapa A, Morales-Sosa P, Miller T, Miller SA, Holsapple D, Gerhart P, Momtahan E, Jack JL, Leiva E, Rapp SR, Shelton LG, Pierce RA, Martin-Brown S, Florens L, Washburn MP, Mohan RD. eLife. 2019;8. doi: 10.7554/eLife.49677.
Holliday MJ, Witt A, Rodriguez Gama A, Walters BT, Arthur CP, Halfmann R, Rohou A, Dueber EC, Fairbrother WJ. Nat Commun. 2019;10:3070. doi: 10.1038/s41467-019-10953-z.
Cao C, Lemaire LA, Wang W, Yoon PH, Choi YA, Parsons LR, Matese JC, Wang W, Levine M, Chen K. Nature. 2019;571:349-354.
Nil Z, Millan RH, Gerbich T, Leal P, Yu Z, Saraf A, Sardiu M, Lange JJ, Yi K, Unruh J, Slaughter B, Si K. Cell. 2019;178:1403-1420 e1421.
Potapova TA, Unruh JR, Yu Z, Rancati G, Li H, Stampfer MR, Gerton JL. J Cell Biol. 2019;218:2492-2513.
Sun J, Mu H, Ip JCH, Li R, Xu T, Accorsi A, Sanchez Alvarado A, Ross E, Lan Y, Sun Y, Castro-Vazquez A, Vega IA, Heras H, Ituarte S, Van Bocxlaer B, Hayes KA, Cowie RH, Zhao Z, Zhang Y, Qian PY, Qiu JW. Mol Biol Evol. 2019;36:1507-1520.
Richardson AI, Yin CC, Cui W, Li N, Medeiros LJ, Li L, Zhang D. Clin Lymphoma Myeloma Leuk. 2019;19:e385-e392. doi: 310.1016/j.clml.2019.1003.1030.
Dhatchinamoorthy K, Unruh JR, Lange JJ, Levy M, Slaughter BD, Gerton JL. J Cell Biol. 2019;218:2124-2135.
Mao Y, Tu R, Huang Y, Mao D, Yang Z, Lau PK, Wang J, Ni J, Guo Y, Xie T. Development. 2019;146:dev174615 doi: 174610.171242/dev.174615.
Tettey TT, Gao X, Shao W, Story BA, Chitsazan AD, Glaser RL, Seidel CW, Conaway RC, Zeitlinger J, Blanchette M, Conaway JW. Cell Rep. 2019;27:3770-3779 e7.
Nakajima YI, Lee ZT, McKinney SA, Swanson SK, Florens L, Gibson MC. J Cell Biol. 2019;218:1824-1838.
Drennan AC, Krishna S, Seeger MA, Andreas MP, Gardner JM, Sether EKR, Jaspersen SL, Rayment I. Mol Biol Cell. 2019;30:1505-1522.
Eickbush MT, Young JM, Zanders SE. Mol Biol Evol. 2019;36:1201-1214.
Peuss R, Zakibe Z, Krishnan J, Merryman MS, Baumann DP, Rohner N.  J Vis Exp. 2019. doi: 10.3791/59334.
Marangoni P, Charles C, Ahn Y, Seidel K, Jheon A, Ganss B, Krumlauf R, Viriot L, Klein OD. JBMR Plus. 2019;3:e10205. doi: 10210.11002/jbm10204.10205.
Hughes SE, Hemenway E, Guo F, Yi K, Yu Z, Hawley RS. PLoS Genet. 2019;15:e1008161. doi: 10.1371/journal.pgen.1008161.
Noe Gonzalez M, Conaway JW, Conaway RC. J Vis Exp. 2019;147: doi: 10.3791/59497.
Tsai HJ, Nelliat AR, Choudhury MI, Kucharavy A, Bradford WD, Cook ME, Kim J, Mair DB, Sun SX, Schatz MC, Li R. Nature. 2019;570:117-121.
Chen J, Gardner JM, Yu Z, Smith SE, McKinney S, Slaughter BD, Unruh JR, Jaspersen SL.  J Cell Biol. 2019;218:1478-1490.
Paul P, Ramachandran S, Xia S, Unruh JR, Conkright-Fincham J, Li R. PLoS One. 2019;14:e0216220. doi: 10.1371/journal.pone.0216220.
Shao W, Alcantara SG, Zeitlinger J. eLife. 2019;8:e41461. doi: 41410.47554/eLife.41461.
Wu Q, Medina SG, Kushawah G, DeVore ML, Castellano LA, Hand JM, Wright M, Bazzini AA.  eLife. 2019;8:e45396. doi: 45310.47554/eLife.45396.
Mei Q, Xu C, Gogol M, Tang J, Chen W, Yu X, Workman JL, Li S. Nucleic Acids Res. 2019;47:3434-3449.
Smoyer CJ, Smith SE, Gardner JM, McCroskey S, Unruh JR, Jaspersen SL. Genetics. 2019;211:1269-1282.
Menon VR, Ananthapadmanabhan V, Swanson S, Saini S, Sesay F, Yakovlev V, Florens L, DeCaprio JA, Washburn MP, Dozmorov M, Litovchick L. Cell Cycle. 2019;18:531-551.
Parker HJ, De Kumar B, Green SA, Prummel KD, Hess C, Kaufman CK, Mosimann C, Wiedemann LM, Bronner ME, Krumlauf R. Nat Commun. 2019;10:1189. doi: 1110.1038/s41467-41019-09197-41468.
Sardiu ME, Gilmore JM, Groppe BD, Dutta A, Florens L, Washburn MP.  Nat Commun. 2019;10:1118. doi: 1110.1038/s41467-41019-09123-y.
Soffers JHM, Li X, Saraf A, Seidel CW, Florens L, Washburn MP, Abmayr SM, Workman JL. Nucleic Acids Res. 2019;47:3383-3394.
Kulkarni RA, Bak DW, Wei D, Bergholtz SE, Briney CA, Shrimp JH, Alpsoy A, Thorpe AL, Bavari AE, Crooks DR, Levy M, Florens L, Washburn MP, Frizzell N, Dykhuizen EC, Weerapana E, Linehan WM, Meier JL. Nat Chem Biol. 2019;15:391-400
Saiz-Ros N, Czapiewski R, Epifano I, Stevenson A, Swanson SK, Dixon CR, Zamora DB, McElwee M, Vijayakrishnan S, Richardson CA, Dong L, Kelly DA, Pytowski L, Goldberg MW, Florens L, Graham SV, Schirmer EC. Cells. 2019;8 E120. doi: 110.3390/cells8020120.
Gao Y, Mao Y, Xu RG, Zhu R, Zhang M, Sun J, Shen D, Peng P, Xie T, Ni JQ. J Genet Genome. 2019;46:19-30.
Lush ME, Diaz DC, Koenecke N, Baek S, Boldt H, St Peter MK, Gaitan-Escudero T, Romero-Carvajal A, Busch-Nentwich EM, Perera AG, Hall KE, Peak A, Haug JS, Piotrowski T.  Elife. 2019;8:e44431. doi: 44410.47554/eLife.44431.
Zhao M, Tao F, Venkatraman A, Li Z, Smith SE, Unruh J, Chen S, Ward C, Qian P, Perry JM, Marshall H, Wang J, He XC, Li L. Cell Rep. 2019;26:652-669 e656.
Torres-Zelada EF, Stephenson RE, Alpsoy A, Anderson BD, Swanson SK, Florens L, Dykhuizen EC, Washburn MP, Weake VM. J Cell Sci. 2019;132:jcs.214072.
Singh VP, Yueh WT, Gerton JL, Duncan FE. Reproduction. 2019;157:305-316.
Lake CM, Nielsen RJ, Bonner AM, Eche S, White-Brown S, McKim KS, Hawley RS. PLoS Genet. 2019;15:e1007886. doi: 1007810.1001371/journal.pgen.1007886.​
Kim J, Ahn Y, Adasooriya D, Woo EJ, Kim HJ, Hu KS, Krumlauf R, Cho SW.  J Dent Res. 2019;98:98-106.
Reviews, Commentaries, Chapters or Books
Miller DE, Cook KR, Hawley RS. PLoS Genet. 2019;15:e1008421. doi: 1008410.1001371/journal.pgen.1008421.
Bhattacharya S, Workman JL. [published ahead of print October 23 2019]. Biochemistry. 2019.
Giniunaite R, McLennan R, McKinney MC, Baker RE, Kulesa PM, Maini PK. [published ahead of print October 18 2019]. Dev Dyn. 2019.
Adams MK, Banks CAS, Miah S, Killer M, Washburn MP. Methods Enzymol. 2019;626:23-40.
Ma R, Wu Y, Zhai Y, Hu B, Ma W, Yang W, Yu Q, Chen Z, Workman JL, Yu X, Li S. [published ahead of print October 11 2019]. Nucleic Acids Res. 2019.
Giniunaite R, Baker RE, Kulesa PM, Maini PK. [published ahead of print October 7 2019]. J Math Biol. 2019.
Popova VV, Workman JL. Nat Cell Biol. 2019;21:1177-1178.
Smoyer CJ, Jaspersen SL. Curr Genet. 2019;65:1099-1106.
Denans N, Baek S, Piotrowski T. [published ahead of print September 26 2019]. Annu Rev Cell Dev Biol. 2019.
Conaway RC, Conaway JW. Nat Struct Mol Biol. 2019;26:771-776.
Duncan EM, Sánchez Alvarado A. Annu Rev Genet. 2019;53:16.11–16.20.
He S, Grasis JA, Nicotra ML, Juliano CE, Schnitzler CE. EvoDevo. 2019;10:20. doi: 10.1186/s13227-13019-10134-13225.
Abmayr SM, Workman JL. Cell Res. 2019;29:694-695.
Daugherty MD, Zanders SE. v.Curr Opin Genet De 2019;58:49-54.
De Carvalho M, Zanders SE. eLife. 2019;8:e46454. doi: 46410.47554/eLife.46454.
Barajas-Azpeleta R, Si K. eLife. 2019;8:e48899. doi: 48810.47554/eLife.48899.
Li Z, He XC, Li L. Curr Opin Hematol. 2019;26:258-265.
Zanders SE, Unckless RL. Curr Biol. 2019;29:R512-R520.
Kline AD, Krantz ID, Bando M, Shirahige K, Chea S, Sakata T, Rao S, Dorsett D, Singh VP, Gerton JL, Horsfield JA, Calof AL, Katz O, Grados M, Raible S, Baranano K, Lyon G, Musio A, Carrico CS, Clemens DK, Caudill P, Massa V, McGill BE, Dommestrup A, O'Connor J, Haaland RE. Am J Med Genet A. 2019;179:1030-1090.
Nolte C, De Kumar B, Krumlauf R. Genesis. 2019:e23306. doi: 10.1002/dvg.23306.
Venkatraman A, Li L. Nat Cell Biol. 2019;21:540-541.
Munoz WA, Trainor PA. Methods Mol Biol: Meiosis. 2019;1976:107-119.
Xu, X., Li L, Zhang C, Meng L. J Assist Reprod Genet. 2019;36:601-602. Correction: J Assist Reprod Genet. 2019 Jul 31. pii: 10.1007/s10815-019-01539-1. doi: 10.1007/s10815-019-01539-1.
Krishnan J, Rohner N. J Diabetes. 2019;11:193-203.
Salim D, Gerton JL. Chromosome Res. 2019;27:73-87.
Potapova TA, Gerton JL. Chromosome Res. 2019;27:109-127.
Taneyhill LA, Moody SA, Cox T, Klein OD, Marcucio R, Schneider RA, Trainor PA. Am J Med Genet A. 2019;179:864-869.
Moustakas-Verho JE, McLennan R, Spengler J, Kulesa PM, Cebra-Thomas JA. Methods Mol Biol. 2019;1920:247-263. Author's Correction: Methods Mol Biol. 2019;1920:C1.
Diaz Jr. RE, Trainor PA. In: Ziermann, D Jr., and Diogo, eds. Heads, Jaws and Muscles Anatomical, Functional and Developmental Diversity in Chordate Evolution, Springer; 2019:207-227.
Porokhovnik L, Gerton JL. Chromosome Res. 2019;27:1-3.
Hu D, Yan H, He XC, Li L.  F1000Res. 2019;8:F1000 Faculty Rev-72. Published 2019 Jan 18. doi:10.12688/f1000research.16793.1