Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Cooperativity enables widespread role of low-affinity motifs in chromatin accessibility and increases regulatory potential
Weilert M, Brennan KJ, Dalal K, Krueger S, Jiang H, Martinez-Corral R, Zeitlinger J. Cell Genom. 2026;6:101339.
Multicomplex Integrative Structural Modeling of a Human Histone Deacetylase Interactome
Nde J, Majila K, Zimmermann RC, Kempf C, Zhang Y, Cesare J, Thornton JL, Workman JL, Florens L, Viswanath S, Washburn MP. Mol Cell Proteomics. 2026;Epub:101651.
3D MicroCT Imaging of Medicago sativa Root Nodules
Crossman SG, Wang M, Nowotarski SH, McClain ML, Sankari S. J Vis Exp. 2026;234 doi: 10.3791/71686.
A Complete Genome for the Common Marmoset
Hebbar P, Potapova T, Loucks H, Ray K, Rodrigues MF, Ryabov F, Malukiewicz J, Yoo D, Gomes de Lima L, Haber A, Kumar S, Banerjee S, Borchers M, Garcia GH, Gardner J, Hachem S, Heath HD, Ha SK, Mastoras M, McNulty B, Menendez J, Munson KM, Pal K, Park J, Plosch S, Roos C, Seligmann WE, Shepelev V, Spruce C, Violich I, Walter L, Makova KD, Thathiah A, Sukoff Rizzo SJ, Silva AC, Carter GW, Miga KH, Eichler EE, Conrad DF, Gerton JL, Alexandrov IA, Paten B. Cell 2026;189:4891-4908
Regulatory logic of neuronal differentiation in the Drosophila visual system
Treese M, Chen YC, Tyree A, Coyne R, Lake C, Tabi OB, Rajesh R, Chen YD, Hassan H, Li H, Desplan C, Özel MN. Proc Natl Acad Sci U S A. 2025;123:e2614314123.
Manipulation of protein translation and stem cell self-renewal by CRISPR activation of rRNA transcription
Wiesbeck M, Alard EL, Merino F, Chowdhury N, Egert L, Danese A, Imhof S, Iraci Borgia M, Rajan A, Fernandez-Novel Marx N, Kepesidis E, Koferle A, Cerron-Alvan LM, Vierl F, Truong TT, Thorwirth M, Bilalli L, Ninkovic J, Schieweck R, Diefenbacher M, Hauck SM, Trainor P, Mardakheh FK, Gotz M, Stricker SH. Science. 2026.
The E-cadherin-Wnt-mir-994 Axis Repurposes a Cadherin Switch for Niche Robustness and Germline Stem Cell Maintenance
Tu R, Yau HL, Deng R, Webb SE, Chen S, Ni J, Xie T. Cell Prolif. 2026:e70245.
Syrah: a pipeline to maximize spatial transcriptomics data output
Brewster C, Mann FG, Jr., Benham-Pyle B, Sánchez Alvarado A. G3 (Bethesda). 2026;16:jkag107 doi: 10.1093/g3journal/jkag107.
Epiblast Lumenogenesis is not a mammalian-specific trait
Weberling A, Shylo NA, Wilson H, McClain M, Kupronis R, Muensch A, Williams SA, Hollfelder F, Trainor PA. Nat Commun. 2026. doi: 10.1038/s41467-026-73768-9.
isl1a Coordinates Onset and Termination of Regeneration of the Zebrafish Lateral Line
Meneses-Giles P, Brennan KJ, Tran NTT, Hintermann A, Lush ME, Piotrowski T. NPJ Regen Med. 2026.
RNase P/MRP subunits chaperone telomeraseholoenzyme assembly in fission yeast
Pan L, Patterson V, Mockel MM, Helston RM, Wellinger RJ, Zappulla DC, Baumann P. EMBO Rep. 2026.
The human parasite, Toxoplasma gondii, is paralyzed without two components of the apical polar ring
Munera Lopez J, Arias Padilla LF, Tengganu IF, Hao Y, Zhang Y, Florens L, Murray JM, Hu K. PLoS Pathogens 2026;22:e1014378.
Synergistic Role of Retinoid and Gata3 Signaling in Olfactory Epithelium Development
Matsushita A, Tsujimoto T, Xiuping N, Omi-Sugihara M, Xu L, Mithun S, Natsuyama S, Ohara H, Koga S, Inubushi T, Sandell LL, Trainor PA, Yamashiro T, Kurosaka H. Synergistic role of retinoid and Gata3 signaling in olfactory epithelium development. Congenit Anom (Kyoto). 2026;66:e70060.
Loss of FAM60A disrupts Sin3/HDAC control of the Hippo signaling and promotes oncogenic YAP1 activation
Miah M, Huda MN, Islam MR, Gerald D, Khator S, Saha A, Alam J, Thornton JL, Gies A, Bauer MA, Stephens KE, Nagalo BM, Rahman MA, Washburn MP, Miah S. Cell Death & Dis. 2026.
Generating vasculature and immune cell-chimeric tumoroids via intraperitoneal Xenograft
Gao W, Bakheet A, Li H, Zhang D, Fabec S, Esmaeili N, Gilbert S, Liu R, Ding X, Cai D, Zhang L, Li L, Han X. Cancer Lett. 2026;638:218136.
Cell death modalities modulate inflammatory and regenerative programs in zebrafish sensory organs
Munch D, Chen S, Ellis E, Denans N, Lush ME, Petentler K, Javier JE, Bae K, Piotrowski T. Nat Commun. 2026;17 doi: 10.1038/s41467-026-72517-2.
An expanded reference catalog of translated open reading frames for biomedical research
Chothani S, Ruiz-Orera J, Tierney JAS, Swirski MI, Tjeldnes H, Kok LW, Clauwaert J, Deutsch EW, Alba MM, Aspden JL, Baranov PV, Bazzini AA, Bruford EA, Brunet MA, Cardon T, Carvunis AR, Casola C, Choudhary JS, Dean K, Faridi P, Fierro-Monti I, Fournier I, Frankish A, Gerstein M, Hubner N, Jiang Y, Kellis M, Martinez TF, Menschaert G, Ni P, Orchard S, Roucou X, Rozowsky J, Salzet M, Siragusa M, Slavoff S, Ternette N, Vizcaino JA, Wacholder A, Wu W, Xie Z, Yang YT, Moritz RL, Valen E, Mudge J, van Heesch S, Prensner JR, Rackham OJL. Nucleic Acids Res. 2026;54.
Ribosomal modifications are associated with mesenchymal fate selection in the neural crest lineage
Poverennaya I, Murtazina A, Li L, Maili L, Sourada L, Montano-Gutierrez LF, Galimullina R, Steinschaden T, Kaiser M, Zikmund T, Goralija A, Gao T, Attina A, Clara O, Bartenhagen C, Erickson A, Gershtein Y, Chen S, Polaskova K, Sterba J, Semasch B, Anderson ER, Prakash V, Vincent T, Arceo M, Kogner P, Schlisio S, Kharchenko PV, David A, Kaiser J, Fischer M, Skoda J, Trainor PA, Chagin AS, Adameyko I.Nat Commun. 2026;17:2326 doi: 10.1038/s41467-026-70375-6.
BacA(SbmA) importer of legume symbiotic NCR peptides: Protein architecture, function, and evolutionary implications
Arnold MFF, Sankari S, Deutsch M, Gruber CC, Guerra-Garcia FJ, Beis K, Walker GC. Proc Natl Acad Sci U S A. 2026;123:e2526811123.
Ancestral Chromosome-Level Assemblies Reveal Posthybridization Genome Evolution in the New Mexico Whiptail Lizard (Aspidoscelis neomexicanus).
Ho DV, Odell A, Tormey D, Deimler N, Patterson V, Tsuchiya D, Klabacka RL, Schnittker RR, Baumann DP, Neaves WB, Barley AJ, Baumann P. Genome Biol Evol. 2025;17.
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