Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Biophysical processes of morphogenesis in lizard lungs
Hill K, Griffing AH, Palmer MA, Lemma B, Lupo AS, Gamble T, Shylo NA, Kosmrlj A, Trainor PA, Nelson CM. Dev Dyn. 2025.
CRISPR-RfxCas13d screening uncovers Bckdk as a post-translational regulator of maternal-to-zygotic transition in teleosts
Hernandez-Huertas L, Moreno-Sanchez I, Crespo-Cuadrado J, Vargas-Baco A, da Silva Pescador G, Zhang Y, Wen Z, Florens L, Santos-Pereira JM, Bazzini AA, Moreno-Mateos MA. EMBO J. 2025;44:7021-7059.
The synaptonemal complex component corolla regulates meiotic crossover formation in Drosophila melanogaster
Williams S, McKown G, Yu Z, Gardner J, Staber C, Gibson MC, Hawley RS. Chromosoma. 2025;134:10.
A proximity labeling approach to identify proteins that associate with synaptonemal complex components in Drosophila melanogaster females
Hughes SE, Viermann C, James M, Banks C, Hawley RS. bioRxiv. 2025.
A needed nomenclature for nucleosomes
Keogh MC, Almouzni G, Andrews AJ, Armache KJ, Arrowsmith CH, Baek SH, Bedford MT, Bernstein E, Cote J, David Y, Denu JM, Fierz B, Garcia BA, Glass KC, Gozani O, Helin K, Henikoff S, Jensen ON, Josefowicz SZ, Kelleher NL, Kutateladze TG, Lindner HH, Lu C, Luger K, Mallick P, Musselman CA, Muir TW, Pasa-Tolic L, Schneider R, Shi X, Shi Y, Sidoli S, Smith LM, Tyler JK, Wolberger C, Workman JL, Strahl BD, Young NL. Mol Cell. 2025;85:3554-3561.
Molecular and cellular characterization of planarian stem cell microenvironments
Mann FG, Jr., Brewster CE, Vuu DM, Mir M, Galton R, Nien S-F, Dewars ER, Guerrero-Hernandez C, Morrison JA, McKinney MC, Maddera LE, McClain ML, Hall KE, Malloy S, Chen S, Slaughter BD, McKinney SA, Nowotarski SH, Perera A, Benham-Pyle B, Sánchez Alvarado A. Cell Rep. 2025.
ASPPs multimerize protein phosphatase 1
Wei DT, Morrison KN, Beacham GM, Beyrent E, Zhang Y, Florens L, Hollopeter G. ASPPs multimerize protein phosphatase 1. PLoS Genet. 2025.
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
Potapova TA, Kostos P, McKinney S, Borchers M, Haug J, Guarracino A, Solar SJ, Mattingly M, Anez GM, de Lima LG, Wang Y, Zhao C, Hall K, Gogol M, Hoffman S, Antipov D, Rhie A, Cechova M, Miga KH, Garrison E, Phillippy AM, Gerton JL. Cell Genom. 2025:101031.
Impacts of stress and aging on spore health in Schizosaccharomyces pombe
Nuckolls NL, Eickbush MT, Lange JJ, Wood CJ, Nowotarski SH, Zanders SE. Microbiol Spectr. 2025;13:e0171025.
Elevated DNA Damage without signs of aging in the short-sleeping Mexican Cavefish
Lloyd E, Xia F, Moore K, Zertuche Mery C, Rastogi A, Kozol RA, Kenzor O, Warren W, Appelbaum L, Moran RL, Zhao C, Duboue ER, Rohner N, Keene AC. eLife 2025;13.
The Drosophila mauritiana synaptonemal complex protein C(3)G repatterns the recombination landscape of Drosophila melanogaster
Hughes SE, Staber C, McKown G, Yu Z, Blumenstiel JP, Hawley RS. PLoS Genet. 2025;21:e1011882.
Identification of neural crest and melanoma cancer cell invasion and migration genes using high-throughput screening and deep attention networks
Kasemeier-Kulesa JC, Martina Perez S, Baker RE, Kulesa PM. [published ahead of print July 2025]. Dev Dyn. 2025.
Cave Adaptation Favors Aging Resilience in the Mexican Tetra
Cobham AE, Kenzior A, Morales-Sosa P, Javier JE, Swanson S, Wood C, Rohner N. NPJ Metab Health Dis. 2024;3:33.
A genetically tractable non-vertebrate system to study complete camera-type eye regeneration
Accorsi A, Pardo B, Ross E, Corbin TJ, McClain M, Weaver K, Delventhal K, Gattamraju A, Morrison JA, McKinney MC, McKinney SA, Sánchez Alvarado A. Nat Commun. 2025;16:6698 doi: 10.1038/s41467-025-61681-6.
From Development to Regeneration: Insights into Flight Muscle Adaptations from Bat Muscle Cell Lines
Camacho J, Zhao C, Deng F, Pena V, Morales-Sosa P, Bernal-Rivera A, Yang B, Huang S, Ghosh S, Katt M, Castellano L, Maddera C, Yu Z, Rohner N. Cells. 2025;14:1190 doi: 10.3390/cells14151190.
Multinucleated giant cells are hallmarks of ovarian aging with unique immune and degradation-associated molecular signatures
Converse A, Perry MJ, Dipali SS, Isola JVV, Kelly EB, Varberg JM, Zelinski MB, Stout MB, Pritchard MT, Duncan FE. PLoS Biol. 2025;23:e3003204.
prdm1a drives a fate switch between hair cells of different mechanosensory organs
Sandler JE, Tsai YY, Chen S, Sabin L, Lush ME, Sur A, Ellis E, Tran NTT, Cook M, Scott AR, Kniss JS, Farrell JA, Piotrowski T. Nat Commun. 2025;16:7662 doi: 10.1038/s41467-025-62942-0.
The formation and propagation of human Robertsonian chromosomes
de Lima LG, Guarracino A, Koren S, Potapova T, McKinney S, Rhie A, Solar SJ, Seidel C, Fagen B, Walenz BP, Bouffard GG, Brooks SY, Peterson M, Hall K, Crawford J, Young AC, Pickett BD, Garrison E, Phillippy AM, Gerton JL. Nature. 2024.
Population genomics of premature termination codons in cavefish with substantial trait loss
Roback EY, Ferrufino E, Moran RL, Shennard D, Mulliniks C, Gallop J, Weagley J, Miller J, Fily Y, Ornelas-Garcia CP, Rohner N, Kowalko JE, McGaugh SE. Mol Biol Evol. 2025;42.
Genomic evolution of EGF-CFC genes in deuterostomes.
Shylo NA, Trainor PA. [published ahead of print June 2025]. Dev Dyn. 2025.
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Perspective on recent developments and challenges in regulatory and systems genomics
Zeitlinger J, Roy S, Ay F, Mathelier A, Medina-Rivera A, Mahony S, Sinha S, Ernst J. Bioinform Adv. 2025;5:vbaf106.
Embryology 2024: a summer like no other
Abshire KM, Dagher L, Espinoza F, Gupta A, Hammond JE, Lion AT, Merkuri F, Miao Y, Neiro J, Pahima M, Prabhakara C, Sonpho EK, Styfhals R, Trani Bustos M, Zimmer F. Development. 2025;152.
From conservation to adaptation: Understanding the Synaptonemal Complex's evolutionary dynamics.
Williams S, Hawley RS. Curr Opin Genet Dev. 2025;93:102349.
Signalling by co-operative higher-order assembly formation: linking evidence at molecular and cellular levels
Kobe B, Nanson JD, Hoad M, Blumenthal A, Gambin Y, Sierecki E, Stacey KJ, Ve T, Halfmann R. Biochem J. 2025;482:275-294.
