Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Functional testing of microproteins in a vertebrate model of development
Treichel AJ, Bazzini AA, Tornini VA. Methods Mol Biol 2026;2992:183-201.
Second Special Issue on Methods for Omics Research: Proteome Research and Beyond
Florens L, Dong MQ, LaBaer J. J Proteome Res. 2023;22:1381-1384.
Multiplexed Quantitative Proteomics Analysis of Developing Human Brain Organoids
Florens L, Saraf A, Hao Y, Zhang Y, Wang Y, Parmely TJ, Zhao C, Washburn MP. In: W Wang, Y Wang, and N Rohner, eds. Emerging Model Organisms; 2023;194:325-355.
To Bead or not to Bead? That is the question with cross-linking mass spectrometry.
Florens L, Hao Y, Zhang Y, Wen Z, Banks CAS, Washburn MP. J Biomol Tech : JBT. 2020;31:S24.
New and Improved Tools for the Omics Crew
Florens, L., Dong, M.-Q., LaBaer, J. J Proteome Res 2020;19:2525-2528. doi:10.1021/acs.jproteome.0c00328.
Generation and isolation of recombinant retinoid oxidoreductase complex
Adams MK, Belyaeva OV, Kedishvili NY. Methods Enzymol. 2020;637:77-93.
Purification and enzymatic assay of class I histone deacetylase enzymes
Adams MK, Banks CAS, Miah S, Killer M, Washburn MP. Methods Enzymol. 2019;626:23-40.
Unravelling the biology of chromatin in health and cancer using proteomic approaches
Eubanks CG, Dayebgadoh G, Liu X, Washburn MP. Expert Rev Proteomics.2017;14:905-915.
Advancement of mass spectrometry-based proteomics technologies to explore triple negative breast cancer
Miah S, Banks CA, Adams MK, Florens L, Lukong KE, Washburn MP. Mol Biosyst.2016;13:42-55.
Isolation, Proteomic Analysis, and Microscopy Confirmation of the Liver Nuclear Envelope Proteome
Korfali N, Florens L, Schirmer EC. Methods Mol Biol. 2016;1411:3-44.
There is no human interactome
Washburn MP. Genome Biol. 2016;17:48.
Reshaping the Chromatin and Epigenetic Landscapes with Quantitative Mass Spectrometry
Washburn MP, Zhao Y, Garcia BA. Mol Cell Proteomics.2016;15:753-754.
The H-Index of 'An Approach to Correlate Tandem Mass Spectral Data of Peptides with Amino Acid Sequences in a Protein Database'.
Washburn MP. J Am Soc Mass Spectrom. 2015;26:1799-803.
Shotgun Proteomics.
Banks CAS, Lakshminarasimhan M, Washburn MP. In: eLS Chichester, England: John Wiley & Sons, Ltd; 2014. DOI: 10.1002/9780470015902.a0006197.pub2
Quantitative Proteomics Characterization of Chromatin-Remodeling Complexes in Health and Disease.
Lakshminarasimhan M, Washburn MP. In: Emili A, Greenblatt J, Wodak S, eds. Systems Analysis of Chromatin-Related Protein Complexes in Cancer. SpringerLink; 2014:177-196.
Quantitative proteomics.
Yates JR, 3rd, Washburn MP. Anal Chem. 2013;85:8881.
Affinity purification of protein complexes for analysis by multidimensional protein identification technology.
Banks CA, Kong SE, Washburn MP. Protein Expr Purif. 2012;86:105-119.
Construction of protein interaction networks based on the label-free quantitative proteomics.
Sardiu ME, Washburn MP. Methods Mol Biol. 2011;781:71-85.
Building protein-protein interaction networks with proteomics and informatics tools.
Sardiu ME, Washburn MP. J Biol Chem. 2011;286:23645-23651.
Unraveling the dynamics of protein interactions with quantitative mass spectrometry.
Ramisetty SR, Washburn MP. Crit Rev Biochem Mol Biol. 2011;46:216-228.
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