Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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NR6A1 is essential for neural crest cell specification, formation and survival.
Moore Zajic EL, Munoz WA, Dennis JF, Bhatt S, Sakai D, Achilleos A, Zhao R, Lamb M, Price AJ, Seidel C, Tiana M, Barral A, Clawson D, Manzanares M, Trainor PA. Nat Commun. 2026.
Molecular and cellular characterization of planarian stem cell microenvironments
Mann FG, Jr., Brewster CE, Vuu DM, Mir M, Galton R, Nien S-F, Dewars ER, Guerrero-Hernandez C, Morrison JA, McKinney MC, Maddera LE, McClain ML, Hall KE, Malloy S, Chen S, Slaughter BD, McKinney SA, Nowotarski SH, Perera A, Benham-Pyle B, Sánchez Alvarado A. Cell Rep. 2025.
Competencies for bioinformatics core facility scientists: extension of the ISCB competency framework for bioinformatics
Lloret-Llinares M, Carvajal-Lopez P, Downing T, Gogol M, Ho Sui S, Nonell L, Paladin L, Reid AJ, Pomann GM, Brooksbank C. Bioinform Adv. 2025;5:vbaf206 doi: 10.1093/bioadv/vbaf206.
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
Potapova TA, Kostos P, McKinney S, Borchers M, Haug J, Guarracino A, Solar SJ, Mattingly M, Anez GM, de Lima LG, Wang Y, Zhao C, Hall K, Gogol M, Hoffman S, Antipov D, Rhie A, Cechova M, Miga KH, Garrison E, Phillippy AM, Gerton JL. Cell Genom. 2025:101031.
From Development to Regeneration: Insights into Flight Muscle Adaptations from Bat Muscle Cell Lines
Camacho J, Zhao C, Deng F, Pena V, Morales-Sosa P, Bernal-Rivera A, Yang B, Huang S, Ghosh S, Katt M, Castellano L, Maddera C, Yu Z, Rohner N. Cells. 2025;14:1190 doi: 10.3390/cells14151190.
prdm1a drives a fate switch between hair cells of different mechanosensory organs
Sandler JE, Tsai YY, Chen S, Sabin L, Lush ME, Sur A, Ellis E, Tran NTT, Cook M, Scott AR, Kniss JS, Farrell JA, Piotrowski T. Nat Commun. 2025;16:7662 doi: 10.1038/s41467-025-62942-0.
A repeatedly evolved mutation in Cryptochrome-1 of subterranean animals alters behavioral and molecular circadian rhythms
Swaminathan A, Kenzior A, Price A, Li H, McCoin C, Hintermann A, Weaver K, Morris N, Keene AC, Rohner N. iScience. 2025;28:112874.
Splicing Defects and Cell Death Cause SF3B2-Linked Craniofacial Microsomia.
Rao S, Watt KEN, Maili L, Lamb M, Farrow E, Hassan H, Weaver K, Miller B, Dash S, Cox LL, Gallacher L, Kant SG, Gibson M, Pastinen T, Li D, Bhoj EJK, Zhu H, Zhang J, Zhang YB, Tan TY, Trainor PA, Cox TC. J Dent Res. 2025:220345251325818.
Stem and progenitor cell proliferation are independently regulated by cell type-specific cyclinD genes
Lush ME, Tsai YY, Chen S, Munch D, Peloggia J, Sandler JE, Piotrowski T. Nat Commun. 2025;16:5913 doi: 10.1038/s41467-025-60251-0.
Reproductive Adaptation of Astyanax mexicanus Under Nutrient Limitation
Xia F, Santacruz A, Wu D, Bertho S, Fritz E, Morales-Sosa P, McKinney S, Nowotarski SH, Rohner N. Dev Biol. 2025.
Differentially expressed miRNAs offer new perspective into cave adaptation of Astyanax mexicanus
Biswas T, Hassan H, Rohner N. Ann N Y Acad Sci. 2025.
SNORD113–114 cluster maintains haematopoietic stem cell self-renewal via orchestrating the translation machinery
Wang H, Zhang Z, Han C, Jiang P, Xu J, Han Y, Huang D, Li J, Zhou J, Durnin M, Chen S, Liu Y, Sheng J, Cao J, Liu J, Liu B, Yu J, Wang F, Qian P. Nat Cell Biol. 2025;27:246-261.
Patterns of crossover distribution in Drosophila mauritiana necessitate a re-thinking of the centromere effect on crossing over
Hawley RS, Price A, Li H, Jagannathan M, Staber C, Hughes SE, Williams S, Perera A, Egidy RR, Lawlor A, Miller DE, Blumenstiel JP. Genetics 2024.
Comparative analysis of neural crest development in chick and mouse
Morrison JA, Pushel I, McLennan R, McKinney MC, Gogol MM, Scott A, Krumlauf R, Kulesa PM. Dev Biol. 2024;519:142-149.
Chromatin remodeller Chd7 is developmentally regulated in the neural crest by tissue-specific transcription factors
Williams RM, Taylor G, Ling ITC, Candido-Ferreira I, Fountain DM, Mayes S, Ates-Kalkan PS, Haug JO, Price AJ, McKinney SA, Bozhilovh YK, Tyser RCV, Srinivas S, Hughes JR, Sauka-Spengler T. PLoS Biol. 2024;22:e3002786.
C G composition in transposon-derived genes is increased in FXD with perturbed immune system
Suganuma T, Hassan H, Gogol M, Workman JL. NAR Mol Med. 2024;1:ugae015.
Sugar assimilation underlying dietary evolution of Neotropical bats
Camacho J, Bernal-Rivera A, Pena V, Morales-Sosa P, Robb SMC, Russell J, Yi K, Wang Y, Tsuchiya D, Murillo-Garcia OE, Rohner N. [published ahead of print August 28 2024]. Nat Ecol Evol. 2024.
Identification and characterization of intermediate states in mammalian neural crest cell epithelial to mesenchymal transition and delamination
Zhao R, Moore EL, Gogol MM, Unruh JR, Yu Z, Scott AR, Wang Y, Rajendran NK, Trainor PA. eLife. 2024;13 doi: 10.7554/eLife.92844.
A transcriptomics-based RNAi screen for regulators of meiosis and early stages of oocyte development in Drosophila melanogaster
Hughes SE, Price A, Briggs S, Staber C, James M, Anderson M, Hawley RS. G3 (Bethesda). 2024 doi: 10.1093/g3journal/jkae028.
Topological structures and syntenic conservation in sea anemone genomes
Zimmermann B, Montenegro JD, Robb SMC, Fropf WJ, Weilguny L, He S, Chen S, Lovegrove-Walsh J, Hill EM, Chen CY, Ragkousi K, Praher D, Fredman D, Schultz D, Moran Y, Simakov O, Genikhovich G, Gibson MC, Technau U. Nat Commun. 2023;14:8270.
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