Publications
Publications
Supporting the scientific spirit of transparency, the Stowers Institute for Medical Research makes the data underlying its scientific publications freely accessible to the scientific community. Access to original, unprocessed data allows other scientists to validate and extend findings made by Stowers researchers.
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Competencies for bioinformatics core facility scientists: extension of the ISCB competency framework for bioinformatics
Lloret-Llinares M, Carvajal-Lopez P, Downing T, Gogol M, Ho Sui S, Nonell L, Paladin L, Reid AJ, Pomann GM, Brooksbank C. Bioinform Adv. 2025;5:vbaf206 doi: 10.1093/bioadv/vbaf206.
ASPPs multimerize protein phosphatase 1
Wei DT, Morrison KN, Beacham GM, Beyrent E, Zhang Y, Florens L, Hollopeter G. ASPPs multimerize protein phosphatase 1. PLoS Genet. 2025.
Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
Potapova TA, Kostos P, McKinney S, Borchers M, Haug J, Guarracino A, Solar SJ, Mattingly M, Anez GM, de Lima LG, Wang Y, Zhao C, Hall K, Gogol M, Hoffman S, Antipov D, Rhie A, Cechova M, Miga KH, Garrison E, Phillippy AM, Gerton JL. Cell Genom. 2025:101031.
Impacts of stress and aging on spore health in Schizosaccharomyces pombe
Nuckolls NL, Eickbush MT, Lange JJ, Wood CJ, Nowotarski SH, Zanders SE. Microbiol Spectr. 2025;13:e0171025.
Elevated DNA Damage without signs of aging in the short-sleeping Mexican Cavefish
Lloyd E, Xia F, Moore K, Zertuche Mery C, Rastogi A, Kozol RA, Kenzor O, Warren W, Appelbaum L, Moran RL, Zhao C, Duboue ER, Rohner N, Keene AC. eLife 2025;13.
Gene-environment interactions modulate the phenotypic severity in mouse models of congenital craniofacial syndromes
Fitriasari S, Fiorino R, Truong TH, McKinney MC, Dixon J, Dixon MJ, Trainor PA. J Clin Invest. 2025.
The Drosophila mauritiana synaptonemal complex protein C(3)G repatterns the recombination landscape of Drosophila melanogaster
Hughes SE, Staber C, McKown G, Yu Z, Blumenstiel JP, Hawley RS. PLoS Genet. 2025;21:e1011882.
Identification of neural crest and melanoma cancer cell invasion and migration genes using high-throughput screening and deep attention networks
Kasemeier-Kulesa JC, Martina Perez S, Baker RE, Kulesa PM. Dev Dyn. 2026;255:25-42.
Cave Adaptation Favors Aging Resilience in the Mexican Tetra
Cobham AE, Kenzior A, Morales-Sosa P, Javier JE, Swanson S, Wood C, Rohner N. NPJ Metab Health Dis. 2024;3:33.
A genetically tractable non-vertebrate system to study complete camera-type eye regeneration
Accorsi A, Pardo B, Ross E, Corbin TJ, McClain M, Weaver K, Delventhal K, Gattamraju A, Morrison JA, McKinney MC, McKinney SA, Sánchez Alvarado A. Nat Commun. 2025;16:6698 doi: 10.1038/s41467-025-61681-6.
From Development to Regeneration: Insights into Flight Muscle Adaptations from Bat Muscle Cell Lines
Camacho J, Zhao C, Deng F, Pena V, Morales-Sosa P, Bernal-Rivera A, Yang B, Huang S, Ghosh S, Katt M, Castellano L, Maddera C, Yu Z, Rohner N. Cells. 2025;14:1190 doi: 10.3390/cells14151190.
Multinucleated giant cells are hallmarks of ovarian aging with unique immune and degradation-associated molecular signatures
Converse A, Perry MJ, Dipali SS, Isola JVV, Kelly EB, Varberg JM, Zelinski MB, Stout MB, Pritchard MT, Duncan FE. PLoS Biol. 2025;23:e3003204.
Autonomous follicle quality control mechanisms: innate immune signaling capabilities of granulosa cells
Hashim PH, Perry MJ, Pritchard MT, Gerton JL, Duncan FE. Reproduction. 2025;169:e250042.
Poly (A) binding protein 2 is critical for stem cell differentiation during regeneration in the planarian Schmidtea mediterranea
Mukundan N, Hariharan N, Sasidharan V, Lakshmanan V, Palakodeti D, Jamora C. Front Cell Dev Biol. 2024;12:1433142.
prdm1a drives a fate switch between hair cells of different mechanosensory organs
Sandler JE, Tsai YY, Chen S, Sabin L, Lush ME, Sur A, Ellis E, Tran NTT, Cook M, Scott AR, Kniss JS, Farrell JA, Piotrowski T. Nat Commun. 2025;16:7662 doi: 10.1038/s41467-025-62942-0.
The formation and propagation of human Robertsonian chromosomes
de Lima LG, Guarracino A, Koren S, Potapova T, McKinney S, Rhie A, Solar SJ, Seidel C, Fagen B, Walenz BP, Bouffard GG, Brooks SY, Peterson M, Hall K, Crawford J, Young AC, Pickett BD, Garrison E, Phillippy AM, Gerton JL. Nature. 2024.
Population genomics of premature termination codons in cavefish with substantial trait loss
Roback EY, Ferrufino E, Moran RL, Shennard D, Mulliniks C, Gallop J, Weagley J, Miller J, Fily Y, Ornelas-Garcia CP, Rohner N, Kowalko JE, McGaugh SE. Mol Biol Evol. 2025;42.
Postprandial sleep in short-sleeping Mexican cavefish
Gallman K, Rastogi A, North O, O'Gorman M, Hutton P, Lloyd E, Warren WC, Kowalko JE, Duboue ER, Rohner N, Keene AC. J Exp Zool A Ecol Integr Physiol. 2024;341:1084-1096.
Genomic evolution of EGF-CFC genes in deuterostomes.
Shylo NA, Trainor PA. [published ahead of print June 2025]. Dev Dyn. 2025.
Leveraging chorionic villus biopsies for the derivation of patient-specific trophoblast stem cells
Varberg KM, Moreno-Irusta A, Novoa A, Musser B, Varberg JM, Goering JP, Saadi I, Iqbal K, Okae H, Arima T, Williams J, 3rd, Pisarska MD, Soares MJ. Commun Biol. 2025;8:964.
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